RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g21250.1 View Network Show in Genome Browser |
| Other Names | Os02g0317400 |
| Description | clathrin adaptor complex small chain domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 12609023-12613261 Nucleotide Length: 549 |
| Protein-coding | LOC_Os02g21250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g17430 LOC_Os02g11830 LOC_Os01g61710 LOC_Os02g11840 LOC_Os02g14929 LOC_Os01g19450 LOC_Os01g56070 LOC_Os01g58680 LOC_Os02g21080 LOC_Os01g01369 LOC_Os02g07870 More.. |
| Downstream Genes | LOC_Os12g10560 LOC_Os07g10150 LOC_Os11g07280 LOC_Os03g57040 LOC_Os09g04110 LOC_Os05g24601 LOC_Os03g50350 LOC_Os03g12590 LOC_Os03g50340 LOC_Os08g30480 LOC_Os06g05180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g21250.1 |
| Rice Genome Annotation | LOC_Os02g21250.1 |
| Ricechip | LOC_Os02g21250.1 |
| KEGG | osa:4329152 dosa:Os02t0317400-01 |
| Entrez-Gene | 4329152 |