RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g21520.1 View Network Show in Genome Browser |
| Other Names | Os02g0320300 |
| Description | chalcone isomerase 3, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 12765282-12772122 Nucleotide Length: 843 |
| Protein-coding | LOC_Os02g21520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54540 |
| Downstream Genes | LOC_Os03g08790 LOC_Os09g32988 LOC_Os03g62630 LOC_Os09g10760 LOC_Os03g03020 LOC_Os08g25900 LOC_Os08g15500 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR168b |
| Pathways | |
|---|---|
| KEGG Pathways | rn00941 |
| Metacyc Pathways | PWY-5059 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g21520.1 |
| Rice Genome Annotation | LOC_Os02g21520.1 |
| Ricechip | LOC_Os02g21520.1 |
| KEGG | osa:4329165 dosa:Os02t0320300-01 |
| Entrez-Gene | 4329165 |