RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g22260.1 View Network Show in Genome Browser |
| Other Names | Os02g0328300 |
| Description | fruit protein PKIWI502, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 13280849-13292533 Nucleotide Length: 864 |
| Protein-coding | LOC_Os02g22260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48690 LOC_Os02g15900 LOC_Os01g05080 LOC_Os01g25600 LOC_Os01g71190 LOC_Os01g52170 LOC_Os01g04900 |
| Downstream Genes | LOC_Os03g34040 LOC_Os03g39830 LOC_Os10g10170 LOC_Os06g22690 LOC_Os09g30410 LOC_Os07g05400 LOC_Os03g57120 LOC_Os08g42850 LOC_Os06g49160 LOC_Os03g59640 LOC_Os03g15870 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2104 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g22260.1 |
| Rice Genome Annotation | LOC_Os02g22260.1 |
| Ricechip | LOC_Os02g22260.1 |
| KEGG | osa:4329197 dosa:Os02t0328300-01 |
| Entrez-Gene | 4329197 |