RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g24020.1 View Network Show in Genome Browser |
| Other Names | Os02g0436400 |
| Description | dihydrodipicolinate reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 13917235-13923065 Nucleotide Length: 1032 |
| Protein-coding | LOC_Os02g24020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49430 LOC_Os01g08560 LOC_Os02g02410 LOC_Os01g33360 LOC_Os01g62290 LOC_Os01g32870 LOC_Os02g10220 LOC_Os01g60790 LOC_Os01g38970 LOC_Os02g20394 LOC_Os02g03600 More.. |
| Downstream Genes | LOC_Os03g02690 LOC_Os05g27940 LOC_Os03g16880 LOC_Os06g02620 LOC_Os05g08840 LOC_Os07g10720 LOC_Os09g31486 LOC_Os12g07060 LOC_Os11g47760 LOC_Os03g02260 LOC_Os06g10990 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR164a osa-miR164b osa-miR164f osa-miR164c osa-miR319a-3p |
| Pathways | |
|---|---|
| KEGG Pathways | rn00300 rn01100 rn01110 rn01120 |
| Metacyc Pathways | DAPLYSINESYN-PWY PWY-5097 PWY-2941 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g24020.1 |
| Rice Genome Annotation | LOC_Os02g24020.1 |
| Ricechip | LOC_Os02g24020.1 |
| KEGG | osa:4329224 dosa:Os02t0436400-01 |
| Entrez-Gene | 4329224 |