RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g24354.1 View Network Show in Genome Browser |
| Other Names | Os02g0440000 |
| Description | pyridoxal-dependent decarboxylase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 14124433-14132084 Nucleotide Length: 1473 |
| Protein-coding | LOC_Os02g24354 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01230 LOC_Os01g64090 LOC_Os01g08930 LOC_Os01g57910 LOC_Os01g16940 LOC_Os01g52390 LOC_Os01g59990 LOC_Os01g49290 LOC_Os02g02860 LOC_Os02g01332 LOC_Os01g57460 More.. |
| Downstream Genes | LOC_Os08g44530 LOC_Os08g09350 LOC_Os03g19280 LOC_Os03g60992 LOC_Os08g10570 LOC_Os03g60976 LOC_Os12g37960 LOC_Os10g32550 LOC_Os09g08430 LOC_Os07g20580 LOC_Os09g29840 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00300 rn01100 rn01110 rn01120 |
| Metacyc Pathways | DAPLYSINESYN-PWY PWY-5097 PWY-2941 PWY-2942 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g24354.1 |
| Rice Genome Annotation | LOC_Os02g24354.1 |
| Ricechip | LOC_Os02g24354.1 |
| KEGG | osa:4329234 dosa:Os02t0440000-01 |
| Entrez-Gene | 4329234 |