RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g28720.1 View Network Show in Genome Browser |
| Other Names | Os02g0488600 |
| Description | spotted leaf 11, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 16981477-16985654 Nucleotide Length: 1404 |
| Protein-coding | LOC_Os02g28720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005102 | receptor binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43680 LOC_Os02g27030 |
| Downstream Genes | LOC_Os04g58620 LOC_Os08g38460 LOC_Os03g17660 LOC_Os05g30900 LOC_Os09g30160 LOC_Os09g37020 LOC_Os04g15690 LOC_Os07g06660 LOC_Os12g32970 LOC_Os10g35180 LOC_Os04g48350 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1442 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g28720.1 |
| Rice Genome Annotation | LOC_Os02g28720.1 |
| Ricechip | LOC_Os02g28720.1 |
| KEGG | dosa:Os02t0488600-01 |