RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g28810.1 View Network Show in Genome Browser |
| Other Names | Os02g0489400 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 17035682-17037903 Nucleotide Length: 717 |
| Protein-coding | LOC_Os02g28810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59990 LOC_Os02g14059 LOC_Os01g67134 LOC_Os01g10820 LOC_Os01g64090 LOC_Os02g21660 LOC_Os01g54870 LOC_Os01g61814 LOC_Os02g01560 LOC_Os01g49290 LOC_Os01g25610 More.. |
| Downstream Genes | LOC_Os07g12250 LOC_Os04g50990 LOC_Os11g29190 LOC_Os02g47140 LOC_Os05g40820 LOC_Os05g30530 LOC_Os03g10340 LOC_Os03g22180 LOC_Os11g11390 LOC_Os09g32976 LOC_Os08g23710 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g28810.1 |
| Rice Genome Annotation | LOC_Os02g28810.1 |
| Ricechip | LOC_Os02g28810.1 |
| KEGG | osa:4329381 dosa:Os02t0489400-01 |
| Entrez-Gene | 4329381 |