RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g28830.1 View Network Show in Genome Browser |
| Other Names | Os02g0489550 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 17046461-17052031 Nucleotide Length: 1944 |
| Protein-coding | LOC_Os02g28830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01960 LOC_Os01g43030 LOC_Os02g14130 LOC_Os01g63780 |
| Downstream Genes | LOC_Os07g03070 LOC_Os02g34540 LOC_Os05g01020 LOC_Os03g02680 LOC_Os03g01850 LOC_Os10g41370 LOC_Os06g35530 LOC_Os07g02350 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g28830.1 |
| Rice Genome Annotation | LOC_Os02g28830.1 |
| Ricechip | LOC_Os02g28830.1 |
| KEGG | dosa:Os02t0489550-00 |