RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g29400.1 View Network Show in Genome Browser |
| Other Names | Os02g0496900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 17464020-17464689 Nucleotide Length: 282 |
| Protein-coding | LOC_Os02g29400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67134 LOC_Os01g59990 LOC_Os02g14059 LOC_Os02g27760 LOC_Os02g05330 LOC_Os01g19840 LOC_Os01g10820 LOC_Os01g61814 LOC_Os01g16040 LOC_Os01g60790 LOC_Os01g51020 More.. |
| Downstream Genes | LOC_Os03g54890 LOC_Os03g58430 LOC_Os03g55280 LOC_Os07g07709 LOC_Os03g58050 LOC_Os07g08660 LOC_Os04g51630 LOC_Os07g08330 LOC_Os04g42270 LOC_Os05g40820 LOC_Os07g42450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g29400.1 |
| Rice Genome Annotation | LOC_Os02g29400.1 |
| Ricechip | LOC_Os02g29400.1 |
| KEGG | osa:4329408 dosa:Os02t0496900-01 |
| Entrez-Gene | 4329408 |