RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g30620.1 View Network Show in Genome Browser |
| Other Names | Os02g0510000 |
| Description | dnaJ domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 18227411-18230654 Nucleotide Length: 2205 |
| Protein-coding | LOC_Os02g30620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08560 LOC_Os01g33360 LOC_Os02g02410 LOC_Os01g49430 LOC_Os01g62290 LOC_Os01g32750 LOC_Os02g06300 |
| Downstream Genes | LOC_Os02g39870 LOC_Os12g14070 LOC_Os11g47760 LOC_Os04g35180 LOC_Os12g38180 LOC_Os05g23740 LOC_Os11g08460 LOC_Os05g08840 LOC_Os11g08470 LOC_Os06g46600 LOC_Os09g11250 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167e-3p osa-miR167i-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g30620.1 |
| Rice Genome Annotation | LOC_Os02g30620.1 |
| Ricechip | LOC_Os02g30620.1 |
| KEGG | osa:4329448 dosa:Os02t0510000-01 |
| Entrez-Gene | 4329448 |