RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g30840.2 View Network Show in Genome Browser |
| Other Names | Os02g0512300 |
| Description | RNA pseudouridine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 18385206-18390663 Nucleotide Length: 939 |
| Protein-coding | LOC_Os02g30840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55974 LOC_Os02g20850 LOC_Os01g42850 LOC_Os01g52710 LOC_Os02g02840 LOC_Os01g12900 LOC_Os01g46980 LOC_Os02g29530 LOC_Os01g51320 LOC_Os02g30060 LOC_Os01g12260 More.. |
| Downstream Genes | LOC_Os08g23430 LOC_Os09g04210 LOC_Os03g20570 LOC_Os12g37380 LOC_Os03g05806 LOC_Os08g39080 LOC_Os04g28090 LOC_Os12g08280 LOC_Os05g06840 LOC_Os08g33082 LOC_Os03g22950 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g30840.2 |
| Rice Genome Annotation | LOC_Os02g30840.2 |
| Ricechip | LOC_Os02g30840.2 |
| KEGG | osa:9269812 dosa:Os02t0512300-01 |
| Entrez-Gene | 9269812 |