RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g31140.1 View Network Show in Genome Browser |
| Other Names | Os02g0516400 |
| Description | major ampullate spidroin 2-2, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 18639136-18641888 Nucleotide Length: 825 |
| Protein-coding | LOC_Os02g31140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68760 LOC_Os01g25330 LOC_Os01g34780 LOC_Os01g07740 LOC_Os01g36860 LOC_Os01g66270 LOC_Os01g55110 LOC_Os01g49210 |
| Downstream Genes | LOC_Os03g27930 LOC_Os11g46240 LOC_Os10g34380 LOC_Os06g19470 LOC_Os09g03610 LOC_Os09g37080 LOC_Os05g47960 LOC_Os03g50280 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Reference | |
|---|---|
| PubMed | 21954461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g31140.1 |
| Rice Genome Annotation | LOC_Os02g31140.1 |
| Ricechip | LOC_Os02g31140.1 |
| KEGG | osa:4329477 dosa:Os02t0516400-00 |
| Entrez-Gene | 4329477 |