RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os02g32350.1 View Network Show in Genome Browser |
Other Names | Os02g0523500 |
Description | TUDOR protein with multiple SNc domains, putative, expressed |
Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 19098854-19105533 Nucleotide Length: 2961 |
Protein-coding | LOC_Os02g32350 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0008150 | biological_process | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0008152 | metabolic process | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0006810 | transport | Biological Process | IEA | |
GO:0004518 | nuclease activity | Molecular Function | IEA | |
GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
GO:0003723 | RNA binding | Molecular Function | IEA | |
GO:0005618 | cell wall | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
GO:0005635 | nuclear envelope | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g07200 LOC_Os01g51380 LOC_Os02g02410 LOC_Os01g61380 LOC_Os01g46070 LOC_Os02g01010 LOC_Os02g11830 LOC_Os02g03060 LOC_Os01g63710 LOC_Os02g05330 LOC_Os01g08560 More.. |
Downstream Genes | LOC_Os08g01840 LOC_Os09g24220 LOC_Os06g37180 LOC_Os06g14670 LOC_Os03g52090 LOC_Os08g40110 LOC_Os09g04110 LOC_Os10g25770 LOC_Os05g05860 LOC_Os11g09280 LOC_Os07g14110 More.. |
miRNA Regulations | |
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miRNAs | osa-miR5809 |
Database Links | |
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Gramene | LOC_Os02g32350.1 |
Rice Genome Annotation | LOC_Os02g32350.1 |
Ricechip | LOC_Os02g32350.1 |
KEGG | osa:4329508 dosa:Os02t0523500-01 |
Entrez-Gene | 4329508 |