RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g32430.2 View Network Show in Genome Browser |
| Other Names | Os02g0524600 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 19178212-19180011 Nucleotide Length: 1236 |
| Protein-coding | LOC_Os02g32430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009605 | response to external stimulus | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g13870 LOC_Os01g48990 LOC_Os01g12880 LOC_Os01g62290 LOC_Os01g09460 LOC_Os01g05090 LOC_Os01g12800 LOC_Os01g56490 LOC_Os02g06640 LOC_Os01g42850 LOC_Os02g07760 More.. |
| Downstream Genes | LOC_Os02g47410 LOC_Os10g32550 LOC_Os02g48840 LOC_Os09g30150 LOC_Os06g18830 LOC_Os02g41550 LOC_Os03g04970 LOC_Os07g30300 LOC_Os10g11140 LOC_Os05g43560 LOC_Os04g51370 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g32430.2 |
| Rice Genome Annotation | LOC_Os02g32430.2 |
| Ricechip | LOC_Os02g32430.2 |
| KEGG | osa:4329512 dosa:Os02t0524600-01 |
| Entrez-Gene | 4329512 |