RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g32520.1 View Network Show in Genome Browser |
| Other Names | Os02g0526400 |
| Description | ERD1 protein, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 19251345-19256303 Nucleotide Length: 2817 |
| Protein-coding | LOC_Os02g32520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g39630 LOC_Os01g62500 LOC_Os01g66360 LOC_Os01g53890 |
| Downstream Genes | LOC_Os08g44210 LOC_Os06g06100 LOC_Os09g38759 LOC_Os06g05820 LOC_Os05g08950 LOC_Os04g16820 LOC_Os07g42632 LOC_Os11g13420 LOC_Os05g25400 LOC_Os03g28960 LOC_Os04g41490 More.. |
| Reference | |
|---|---|
| PubMed | 20141629 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g32520.1 |
| Rice Genome Annotation | LOC_Os02g32520.1 |
| Ricechip | LOC_Os02g32520.1 |
| KEGG | osa:4329520 dosa:Os02t0526400-01 |
| Entrez-Gene | 4329520 |