RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g33180.1 View Network Show in Genome Browser |
| Other Names | Os02g0535400 |
| Description | rar1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 19727118-19729888 Nucleotide Length: 546 |
| Protein-coding | LOC_Os02g33180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47770 LOC_Os01g55270 LOC_Os01g65260 |
| Downstream Genes | LOC_Os11g16540 LOC_Os05g31780 LOC_Os06g12530 LOC_Os03g26460 LOC_Os08g27070 LOC_Os02g51000 LOC_Os03g45270 LOC_Os10g42320 LOC_Os04g58640 LOC_Os12g08260 LOC_Os05g31490 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g33180.1 |
| Rice Genome Annotation | LOC_Os02g33180.1 |
| Ricechip | LOC_Os02g33180.1 |
| KEGG | osa:4329567 dosa:Os02t0535400-01 |
| Entrez-Gene | 4329567 |