RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g33420.1 View Network Show in Genome Browser |
| Other Names | Os02g0537400 |
| Description | ATPase, AAA family protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 19860074-19864625 Nucleotide Length: 2469 |
| Protein-coding | LOC_Os02g33420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g39630 LOC_Os01g13250 LOC_Os01g14580 LOC_Os01g46610 |
| Downstream Genes | LOC_Os08g33540 LOC_Os03g07850 LOC_Os07g46410 LOC_Os05g37434 LOC_Os02g48290 LOC_Os06g22140 LOC_Os03g19930 LOC_Os04g44260 LOC_Os12g20310 LOC_Os11g13420 LOC_Os05g25400 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g33420.1 |
| Rice Genome Annotation | LOC_Os02g33420.1 |
| Ricechip | LOC_Os02g33420.1 |
| KEGG | osa:4329576 dosa:Os02t0537400-01 |
| Entrez-Gene | 4329576 |