RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g33430.2 View Network Show in Genome Browser |
| Other Names | Os02g0537500 |
| Description | E2F family transcription factor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 19868199-19873307 Nucleotide Length: 1251 |
| Protein-coding | LOC_Os02g33430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g03060 LOC_Os01g63710 LOC_Os02g15220 LOC_Os02g10790 |
| Downstream Genes | LOC_Os03g05760 LOC_Os10g30420 LOC_Os11g29390 LOC_Os02g56130 LOC_Os05g32600 LOC_Os06g08790 LOC_Os12g26060 LOC_Os12g39210 LOC_Os12g31810 LOC_Os04g10650 LOC_Os03g02680 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g33430.2 |
| Rice Genome Annotation | LOC_Os02g33430.2 |
| Ricechip | LOC_Os02g33430.2 |
| KEGG | osa:4329577 dosa:Os02t0537500-01 |
| Entrez-Gene | 4329577 |