RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g33550.1 View Network Show in Genome Browser |
| Other Names | Os02g0538700 |
| Description | harpin-induced protein 1 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 19954553-19955660 Nucleotide Length: 675 |
| Protein-coding | LOC_Os02g33550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59150 LOC_Os01g11010 LOC_Os01g18240 LOC_Os01g62490 LOC_Os02g13980 LOC_Os01g71474 LOC_Os01g51840 LOC_Os01g06580 |
| Downstream Genes | LOC_Os05g48270 LOC_Os04g33990 LOC_Os06g30950 LOC_Os09g32964 LOC_Os03g13200 LOC_Os04g42620 LOC_Os03g06350 LOC_Os06g11490 LOC_Os05g04820 LOC_Os03g12250 LOC_Os05g02820 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g33550.1 |
| Rice Genome Annotation | LOC_Os02g33550.1 |
| Ricechip | LOC_Os02g33550.1 |
| KEGG | osa:4329582 dosa:Os02t0538700-01 |
| Entrez-Gene | 4329582 |