RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g33600.1 View Network Show in Genome Browser |
| Other Names | Os02g0539500 |
| Description | VQ domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 20000994-20001821 Nucleotide Length: 828 |
| Protein-coding | LOC_Os02g33600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g61080 LOC_Os01g17050 LOC_Os01g66270 |
| Downstream Genes | LOC_Os12g03420 LOC_Os10g42650 LOC_Os08g31660 LOC_Os06g45570 LOC_Os05g44270 LOC_Os04g55240 LOC_Os03g26990 LOC_Os05g27730 LOC_Os06g41450 LOC_Os09g37080 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2102-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g33600.1 |
| Rice Genome Annotation | LOC_Os02g33600.1 |
| Ricechip | LOC_Os02g33600.1 |
| KEGG | osa:9268455 dosa:Os02t0539500-01 |
| Entrez-Gene | 9268455 |