RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g34540.1 View Network Show in Genome Browser |
| Other Names | Os02g0550400 |
| Description | tetratricopeptide repeat containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 20703522-20704963 Nucleotide Length: 993 |
| Protein-coding | LOC_Os02g34540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01030 LOC_Os01g68680 LOC_Os01g43030 LOC_Os01g32184 LOC_Os02g10180 LOC_Os01g74580 LOC_Os02g28830 |
| Downstream Genes | LOC_Os11g16540 LOC_Os10g34540 LOC_Os08g39080 LOC_Os07g03070 LOC_Os07g02300 LOC_Os06g41750 LOC_Os05g05720 LOC_Os05g03910 LOC_Os02g43020 LOC_Os02g34830 LOC_Os07g27180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g34540.1 |
| Rice Genome Annotation | LOC_Os02g34540.1 |
| Ricechip | LOC_Os02g34540.1 |
| KEGG | osa:4329625 dosa:Os02t0550400-01 |
| Entrez-Gene | 4329625 |