RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g34570.1 View Network Show in Genome Browser |
| Other Names | Os02g0550700 |
| Description | exosome complex exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 20728272-20731648 Nucleotide Length: 1188 |
| Protein-coding | LOC_Os02g34570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g66730 LOC_Os01g47256 LOC_Os02g06500 LOC_Os01g40250 LOC_Os01g14950 LOC_Os01g36920 LOC_Os01g36890 LOC_Os01g57910 LOC_Os01g24060 LOC_Os01g48770 LOC_Os02g04100 More.. |
| Downstream Genes | LOC_Os04g43922 LOC_Os03g63720 LOC_Os09g07820 LOC_Os03g03710 LOC_Os03g06190 LOC_Os02g57070 LOC_Os03g62720 LOC_Os08g02360 LOC_Os10g30100 LOC_Os07g07310 LOC_Os05g06350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g34570.1 |
| Rice Genome Annotation | LOC_Os02g34570.1 |
| Ricechip | LOC_Os02g34570.1 |
| KEGG | osa:4329627 dosa:Os02t0550700-01 |
| Entrez-Gene | 4329627 |