RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g34630.1 View Network Show in Genome Browser |
| Other Names | Os02g0551400 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 20763324-20767618 Nucleotide Length: 2160 |
| Protein-coding | LOC_Os02g34630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g57210 |
| Downstream Genes | LOC_Os06g05240 LOC_Os03g53140 LOC_Os07g07310 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00290 rn00660 rn01100 rn01110 rn01210 |
| Metacyc Pathways | ILEUSYN-PWY VALSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g34630.1 |
| Rice Genome Annotation | LOC_Os02g34630.1 |
| Ricechip | LOC_Os02g34630.1 |
| KEGG | osa:4329631 dosa:Os02t0551400-01 |
| Entrez-Gene | 4329631 |