RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g34950.1 View Network Show in Genome Browser |
| Other Names | Os02g0555000 |
| Description | ATP binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 20962938-20966686 Nucleotide Length: 915 |
| Protein-coding | LOC_Os02g34950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68930 LOC_Os01g12470 |
| Downstream Genes | LOC_Os03g19870 LOC_Os02g53230 LOC_Os10g35280 LOC_Os05g02820 LOC_Os07g44410 LOC_Os06g10620 LOC_Os11g29190 LOC_Os12g04010 LOC_Os05g40330 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00400 rn01100 rn01110 |
| Metacyc Pathways | ARO-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g34950.1 |
| Rice Genome Annotation | LOC_Os02g34950.1 |
| Ricechip | LOC_Os02g34950.1 |
| KEGG | osa:4329653 dosa:Os02t0555000-01 |
| Entrez-Gene | 4329653 |