RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g35140.1 View Network Show in Genome Browser |
| Other Names | Os02g0557200 |
| Description | auxin response factor 7, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 21098150-21104225 Nucleotide Length: 2037 |
| Protein-coding | LOC_Os02g35140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g19140 |
| Downstream Genes | LOC_Os11g03160 LOC_Os08g31460 LOC_Os05g14860 LOC_Os05g39240 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g35140.1 |
| Rice Genome Annotation | LOC_Os02g35140.1 |
| Ricechip | LOC_Os02g35140.1 |
| KEGG | osa:4329672 dosa:Os02t0557200-01 |
| Entrez-Gene | 4329672 |