RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g35160.1 View Network Show in Genome Browser |
| Other Names | Os02g0557600 |
| Description | ligatin, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 21115354-21122133 Nucleotide Length: 1812 |
| Protein-coding | LOC_Os02g35160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g58220 LOC_Os01g09890 LOC_Os01g66700 LOC_Os02g02360 LOC_Os02g14929 LOC_Os01g64090 LOC_Os01g40340 LOC_Os02g21660 LOC_Os01g12470 LOC_Os01g49290 LOC_Os02g03440 More.. |
| Downstream Genes | LOC_Os05g41900 LOC_Os07g34589 LOC_Os03g55570 LOC_Os11g40150 LOC_Os05g02510 LOC_Os12g31370 LOC_Os03g25450 LOC_Os07g47420 LOC_Os08g27824 LOC_Os07g44190 LOC_Os11g29190 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g35160.1 |
| Rice Genome Annotation | LOC_Os02g35160.1 |
| Ricechip | LOC_Os02g35160.1 |
| KEGG | osa:4329675 dosa:Os02t0557600-01 |
| Entrez-Gene | 4329675 |