RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g35200.1 View Network Show in Genome Browser |
| Other Names | Os02g0558300 |
| Description | VP15, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 21165035-21165686 Nucleotide Length: 330 |
| Protein-coding | LOC_Os02g35200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04740 LOC_Os02g32460 LOC_Os02g15870 |
| Downstream Genes | LOC_Os12g32230 LOC_Os04g38700 LOC_Os10g35570 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g35200.1 |
| Rice Genome Annotation | LOC_Os02g35200.1 |
| Ricechip | LOC_Os02g35200.1 |
| KEGG | osa:4329680 dosa:Os02t0558300-01 |
| Entrez-Gene | 4329680 |