RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g35630.1 View Network Show in Genome Browser |
| Other Names | Os02g0564400 |
| Description | AAA family ATPase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 21425656-21431714 Nucleotide Length: 1938 |
| Protein-coding | LOC_Os02g35630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32350 LOC_Os01g16530 LOC_Os01g54040 LOC_Os02g08490 LOC_Os02g21970 LOC_Os02g27300 LOC_Os01g28450 LOC_Os01g62500 LOC_Os02g06490 LOC_Os01g04840 LOC_Os02g30150 More.. |
| Downstream Genes | LOC_Os04g44400 LOC_Os03g19350 LOC_Os07g48960 LOC_Os02g42290 LOC_Os03g29810 LOC_Os03g19510 LOC_Os06g20320 LOC_Os12g32790 LOC_Os10g43050 LOC_Os10g21300 LOC_Os03g22430 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g35630.1 |
| Rice Genome Annotation | LOC_Os02g35630.1 |
| Ricechip | LOC_Os02g35630.1 |
| KEGG | osa:4329696 dosa:Os02t0564400-01 |
| Entrez-Gene | 4329696 |