RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g35700.1 View Network Show in Genome Browser |
| Other Names | Os02g0565100 |
| Description | nucleoside diphosphate kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 21453117-21455895 Nucleotide Length: 546 |
| Protein-coding | LOC_Os02g35700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g45370 LOC_Os01g74190 LOC_Os01g33050 LOC_Os02g17280 LOC_Os01g59990 LOC_Os01g70010 LOC_Os01g38620 LOC_Os01g25370 |
| Downstream Genes | LOC_Os03g10520 LOC_Os03g54790 LOC_Os02g39160 LOC_Os09g39910 LOC_Os02g58020 LOC_Os08g45010 LOC_Os04g56330 LOC_Os04g02150 LOC_Os11g41910 LOC_Os03g61600 LOC_Os03g32630 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn01110 rn01100 rn00230 rn00240 |
| Metacyc Pathways | PWY-6126 PWY-6125 PPGPPMET-PWY PWY0-166 PWY-6545 PWY-5687 PWY0-163 DENOVOPURINE2-PWY PWY0-162 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g35700.1 |
| Rice Genome Annotation | LOC_Os02g35700.1 |
| Ricechip | LOC_Os02g35700.1 |
| KEGG | osa:4329701 dosa:Os02t0565100-01 |
| Entrez-Gene | 4329701 |