RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g37590.1 View Network Show in Genome Browser |
| Other Names | Os02g0588500 |
| Description | glycerophosphoryl diester phosphodiesterase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 22687278-22692280 Nucleotide Length: 2250 |
| Protein-coding | LOC_Os02g37590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56330 LOC_Os02g31030 LOC_Os01g59150 |
| Downstream Genes | LOC_Os02g49950 LOC_Os09g26830 LOC_Os11g03160 LOC_Os02g43660 LOC_Os03g11420 LOC_Os12g40890 LOC_Os12g17530 LOC_Os05g04820 LOC_Os09g38540 LOC_Os07g02810 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY0-381 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g37590.1 |
| Rice Genome Annotation | LOC_Os02g37590.1 |
| Ricechip | LOC_Os02g37590.1 |
| KEGG | osa:4329817 dosa:Os02t0588500-02 |
| Entrez-Gene | 4329817 |