RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g37920.1 View Network Show in Genome Browser |
| Other Names | Os02g0592300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 22917816-22924489 Nucleotide Length: 2772 |
| Protein-coding | LOC_Os02g37920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72880 LOC_Os01g73760 LOC_Os01g49390 LOC_Os01g08540 LOC_Os01g69920 LOC_Os01g36840 LOC_Os01g70300 LOC_Os02g30800 LOC_Os02g27000 LOC_Os02g33450 LOC_Os01g55300 More.. |
| Downstream Genes | LOC_Os04g58630 LOC_Os09g24220 LOC_Os05g19270 LOC_Os06g51350 LOC_Os05g46270 LOC_Os07g11050 LOC_Os03g59570 LOC_Os03g24440 LOC_Os05g24660 LOC_Os04g42784 LOC_Os02g56130 More.. |
| Reference | |
|---|---|
| PubMed | 22688271 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g37920.1 |
| Rice Genome Annotation | LOC_Os02g37920.1 |
| Ricechip | LOC_Os02g37920.1 |
| KEGG | osa:4329835 dosa:Os02t0592300-02 |
| Entrez-Gene | 4329835 |