RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g38230.1 View Network Show in Genome Browser |
| Other Names | Os02g0595900 |
| Description | high affinity nitrate transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 23121133-23123149 Nucleotide Length: 621 |
| Protein-coding | LOC_Os02g38230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g58730 LOC_Os01g59110 LOC_Os01g59100 LOC_Os02g08180 LOC_Os01g25386 LOC_Os01g38510 LOC_Os01g59440 LOC_Os01g40860 LOC_Os01g74200 LOC_Os02g10180 LOC_Os01g71400 More.. |
| Downstream Genes | LOC_Os09g27830 LOC_Os10g38930 LOC_Os08g17680 LOC_Os04g58090 LOC_Os06g18000 LOC_Os03g15770 LOC_Os03g58580 LOC_Os06g06180 LOC_Os06g39260 LOC_Os11g09010 LOC_Os09g19734 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g38230.1 |
| Rice Genome Annotation | LOC_Os02g38230.1 |
| Ricechip | LOC_Os02g38230.1 |
| KEGG | osa:4329861 dosa:Os02t0595900-00 |
| Entrez-Gene | 4329861 |