RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g38804.1 View Network Show in Genome Browser |
| Other Names | Os02g0600033 |
| Description | protein phosphatase 2C containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 23454982-23460491 Nucleotide Length: 1554 |
| Protein-coding | LOC_Os02g38804 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g38800 LOC_Os01g40499 LOC_Os01g14932 LOC_Os01g66610 LOC_Os01g44110 LOC_Os01g66640 LOC_Os01g19150 LOC_Os01g65060 LOC_Os01g09860 LOC_Os01g02350 LOC_Os01g71000 More.. |
| Downstream Genes | LOC_Os02g38810 LOC_Os09g15700 LOC_Os04g42700 LOC_Os04g03530 LOC_Os04g12560 LOC_Os04g05560 LOC_Os04g12580 LOC_Os03g37120 LOC_Os11g01740 LOC_Os04g30040 LOC_Os09g20740 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2095-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g38804.1 |
| Rice Genome Annotation | LOC_Os02g38804.1 |
| Ricechip | LOC_Os02g38804.1 |
| KEGG | dosa:Os02t0600033-00 |