RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g38840.1 View Network Show in Genome Browser
Other Names	Os02g0600400
Description	glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 23480215-23486812 Nucleotide Length: 1554
Protein-coding	LOC_Os02g38840

Gene Ontology Classification
GO	Name	Type	Code
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g44050 LOC_Os01g70170 LOC_Os01g50030 LOC_Os01g37760 LOC_Os01g73310 LOC_Os02g05680 LOC_Os02g16550 LOC_Os01g16146 LOC_Os01g46610 LOC_Os02g02700 LOC_Os02g11050 More..
Downstream Genes	LOC_Os09g35970 LOC_Os07g41280 LOC_Os08g43370 LOC_Os03g30300 LOC_Os02g42230 LOC_Os11g29400 LOC_Os06g22140 LOC_Os06g02144 LOC_Os03g50880 LOC_Os06g04270 LOC_Os08g05830 More..

miRNA Regulations
miRNAs	osa-miR2122 osa-miR2098-3p

Pathways
KEGG Pathways	rn00030 rn00480 rn01100 rn01110 rn01120
Metacyc Pathways	OXIDATIVEPENT-PWY

Database Links
Gramene	LOC_Os02g38840.1
Rice Genome Annotation	LOC_Os02g38840.1
Ricechip	LOC_Os02g38840.1
KEGG	osa:4329889 dosa:Os02t0600400-01
Entrez-Gene	4329889