RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g38980.3 View Network Show in Genome Browser |
| Other Names | Os02g0601800 |
| Description | bromodomain domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 23549174-23554382 Nucleotide Length: 1728 |
| Protein-coding | LOC_Os02g38980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g15220 LOC_Os01g11580 LOC_Os02g13140 LOC_Os01g72940 LOC_Os01g49150 LOC_Os02g13110 LOC_Os01g43410 LOC_Os01g59360 LOC_Os01g66330 LOC_Os01g53680 LOC_Os01g40250 More.. |
| Downstream Genes | LOC_Os03g16110 LOC_Os05g48030 LOC_Os09g33980 LOC_Os09g21770 LOC_Os08g32620 LOC_Os07g45064 LOC_Os11g19250 LOC_Os07g08880 LOC_Os03g19340 LOC_Os03g16000 LOC_Os03g58530 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g38980.3 |
| Rice Genome Annotation | LOC_Os02g38980.3 |
| Ricechip | LOC_Os02g38980.3 |
| KEGG | osa:4329897 dosa:Os02t0601800-01 |
| Entrez-Gene | 4329897 |