RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g39050.1 View Network Show in Genome Browser |
| Other Names | Os02g0602500 |
| Description | pre-mRNA-splicing factor ISY1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 23578398-23580847 Nucleotide Length: 936 |
| Protein-coding | LOC_Os02g39050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g13990 LOC_Os01g72690 LOC_Os01g49270 LOC_Os02g01740 LOC_Os02g05310 LOC_Os02g04480 LOC_Os01g01120 LOC_Os02g05410 LOC_Os02g27790 LOC_Os01g63890 LOC_Os02g19860 More.. |
| Downstream Genes | LOC_Os07g44970 LOC_Os03g21990 LOC_Os04g28090 LOC_Os05g22260 LOC_Os06g12910 LOC_Os05g32210 LOC_Os08g35700 LOC_Os02g52250 LOC_Os06g33250 LOC_Os03g50850 LOC_Os05g07050 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g39050.1 |
| Rice Genome Annotation | LOC_Os02g39050.1 |
| Ricechip | LOC_Os02g39050.1 |
| KEGG | osa:4329902 dosa:Os02t0602500-02 |
| Entrez-Gene | 4329902 |