RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g39410.1 View Network Show in Genome Browser |
| Other Names | Os02g0606900 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 23776248-23782298 Nucleotide Length: 1467 |
| Protein-coding | LOC_Os02g39410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g45380 LOC_Os02g34750 LOC_Os02g30900 LOC_Os01g02730 LOC_Os01g26280 LOC_Os01g13060 LOC_Os02g39010 LOC_Os02g18320 LOC_Os02g09359 LOC_Os01g12290 LOC_Os02g12420 More.. |
| Downstream Genes | LOC_Os02g45130 LOC_Os07g35580 LOC_Os07g35700 LOC_Os07g35660 LOC_Os12g06490 LOC_Os11g11780 LOC_Os03g16010 LOC_Os03g31070 LOC_Os07g43560 LOC_Os11g34624 LOC_Os05g41370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g39410.1 |
| Rice Genome Annotation | LOC_Os02g39410.1 |
| Ricechip | LOC_Os02g39410.1 |
| KEGG | osa:4329930 dosa:Os02t0606900-01 |
| Entrez-Gene | 4329930 |