RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g39720.2 View Network Show in Genome Browser |
| Other Names | Os02g0610600 |
| Description | splicing factor, arginine/serine-rich 7, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 23992125-23996393 Nucleotide Length: 612 |
| Protein-coding | LOC_Os02g39720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27940 LOC_Os02g05310 LOC_Os02g12850 LOC_Os02g13990 LOC_Os01g72890 LOC_Os02g37430 LOC_Os02g39010 LOC_Os02g14780 LOC_Os01g43170 LOC_Os02g02510 LOC_Os02g07070 More.. |
| Downstream Genes | LOC_Os08g37960 LOC_Os10g02630 LOC_Os02g58090 LOC_Os04g39444 LOC_Os10g06130 LOC_Os03g18720 LOC_Os07g47630 LOC_Os03g50850 LOC_Os04g41100 LOC_Os02g52140 LOC_Os05g43450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g39720.2 |
| Rice Genome Annotation | LOC_Os02g39720.2 |
| Ricechip | LOC_Os02g39720.2 |
| KEGG | osa:4329951 dosa:Os02t0610600-01 |
| Entrez-Gene | 4329951 |