RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g39840.1 View Network Show in Genome Browser |
| Other Names | Os02g0611500 |
| Description | eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 24068333-24074777 Nucleotide Length: 2343 |
| Protein-coding | LOC_Os02g39840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os05g30240 LOC_Os09g24260 LOC_Os06g01450 LOC_Os04g45650 LOC_Os05g32600 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5836 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g39840.1 |
| Rice Genome Annotation | LOC_Os02g39840.1 |
| Ricechip | LOC_Os02g39840.1 |
| KEGG | osa:4329958 dosa:Os02t0611500-01 |
| Entrez-Gene | 4329958 |