RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g40430.1 View Network Show in Genome Browser |
| Other Names | Os02g0617300 |
| Description | HEAT repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 24489115-24501837 Nucleotide Length: 3516 |
| Protein-coding | LOC_Os02g40430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49000 LOC_Os02g07060 LOC_Os01g59150 |
| Downstream Genes | LOC_Os03g06350 LOC_Os05g11990 LOC_Os07g05470 LOC_Os03g49730 LOC_Os03g44560 LOC_Os04g52460 LOC_Os11g36340 LOC_Os10g35580 LOC_Os12g22630 LOC_Os07g38490 LOC_Os08g42020 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g40430.1 |
| Rice Genome Annotation | LOC_Os02g40430.1 |
| Ricechip | LOC_Os02g40430.1 |
| KEGG | osa:4329991 dosa:Os02t0617300-02 |
| Entrez-Gene | 4329991 |