RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g40730.1 View Network Show in Genome Browser |
| Other Names | Os02g0620600 |
| Description | ammonium transporter protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 24690884-24692884 Nucleotide Length: 1491 |
| Protein-coding | LOC_Os02g40730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g11670 LOC_Os01g53420 LOC_Os01g53380 LOC_Os02g02600 LOC_Os02g10310 LOC_Os01g51410 LOC_Os01g53370 |
| Downstream Genes | LOC_Os05g04220 LOC_Os08g03350 LOC_Os04g30490 LOC_Os05g24550 LOC_Os03g63520 LOC_Os10g11354 LOC_Os09g16090 LOC_Os07g30610 LOC_Os06g18790 LOC_Os05g45180 LOC_Os05g08510 More.. |
| Reference | |
|---|---|
| PubMed | 12803618 12881500 14701935 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g40730.1 |
| Rice Genome Annotation | LOC_Os02g40730.1 |
| Ricechip | LOC_Os02g40730.1 |
| KEGG | osa:4330008 dosa:Os02t0620600-01 |
| Entrez-Gene | 4330008 |