RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g40860.1 View Network Show in Genome Browser |
| Other Names | Os02g0622100 |
| Description | CK1_CaseinKinase_1.5 - CK1 includes the casein kinase 1 kinases, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 24766807-24772750 Nucleotide Length: 1392 |
| Protein-coding | LOC_Os02g40860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os02g15594 LOC_Os01g19130 LOC_Os02g35910 LOC_Os01g43100 LOC_Os01g66520 LOC_Os01g65230 LOC_Os02g38780 LOC_Os02g12600 LOC_Os01g61590 LOC_Os01g43410 More.. |
| Downstream Genes | LOC_Os04g37904 LOC_Os06g48300 LOC_Os04g56450 LOC_Os06g33549 LOC_Os07g32380 LOC_Os02g55560 LOC_Os06g33530 LOC_Os10g39540 LOC_Os04g52000 LOC_Os05g04360 LOC_Os05g50970 More.. |
| Reference | |
|---|---|
| PubMed | 20140455 17486310 17487470 14535884 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g40860.1 |
| Rice Genome Annotation | LOC_Os02g40860.1 |
| Ricechip | LOC_Os02g40860.1 |
| KEGG | osa:4330018 dosa:Os02t0622100-01 |
| Entrez-Gene | 4330018 |