RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g41550.1 View Network Show in Genome Browser |
| Other Names | Os02g0625000 |
| Description | FAD binding domain of DNA photolyase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 24915862-24922079 Nucleotide Length: 1956 |
| Protein-coding | LOC_Os02g41550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0009606 | tropism | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55820 LOC_Os01g12880 LOC_Os01g09460 LOC_Os01g55360 LOC_Os02g03100 LOC_Os01g62290 LOC_Os02g32430 LOC_Os02g32660 LOC_Os01g62870 LOC_Os02g13870 LOC_Os01g12800 More.. |
| Downstream Genes | LOC_Os03g30830 LOC_Os07g30300 LOC_Os03g41080 LOC_Os09g36240 LOC_Os05g27320 LOC_Os03g31490 LOC_Os05g44340 LOC_Os05g38530 LOC_Os03g16860 LOC_Os10g11140 LOC_Os02g52860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g41550.1 |
| Rice Genome Annotation | LOC_Os02g41550.1 |
| Ricechip | LOC_Os02g41550.1 |
| KEGG | osa:9270575 dosa:Os02t0625000-01 |
| Entrez-Gene | 9270575 |