RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g41590.1 View Network Show in Genome Browser |
| Other Names | Os02g0625500 |
| Description | kinase, pfkB family, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 24940446-24946648 Nucleotide Length: 1026 |
| Protein-coding | LOC_Os02g41590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05330 LOC_Os02g27760 LOC_Os01g51380 LOC_Os01g59990 LOC_Os02g01560 LOC_Os01g25610 LOC_Os02g02130 LOC_Os01g67134 LOC_Os01g59730 LOC_Os01g61814 LOC_Os01g19840 More.. |
| Downstream Genes | LOC_Os12g13390 LOC_Os06g48750 LOC_Os02g50350 LOC_Os07g15880 LOC_Os09g07820 LOC_Os07g42450 LOC_Os04g52361 LOC_Os03g22880 LOC_Os05g40820 LOC_Os03g22740 LOC_Os04g42270 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn01100 rn00030 |
| Metacyc Pathways | PWY-5043 ANAEROFRUCAT-PWY PWY-1042 PWY-3801 GLYCOLYSIS RIBOKIN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g41590.1 |
| Rice Genome Annotation | LOC_Os02g41590.1 |
| Ricechip | LOC_Os02g41590.1 |
| KEGG | osa:4330032 dosa:Os02t0625500-01 |
| Entrez-Gene | 4330032 |