RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g41650.2 View Network Show in Genome Browser |
| Other Names | Os02g0626400 |
| Description | phenylalanine ammonia-lyase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 24985255-24987550 Nucleotide Length: 1674 |
| Protein-coding | LOC_Os02g41650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g41630 LOC_Os02g19970 LOC_Os01g46980 LOC_Os02g01010 LOC_Os02g02700 LOC_Os02g07490 LOC_Os01g24030 LOC_Os02g20360 LOC_Os01g62290 LOC_Os01g12260 LOC_Os02g19924 More.. |
| Downstream Genes | LOC_Os05g24550 LOC_Os04g36740 LOC_Os07g49520 LOC_Os06g06090 LOC_Os02g45344 LOC_Os03g16920 LOC_Os11g09280 LOC_Os06g08770 LOC_Os03g19410 LOC_Os04g55720 LOC_Os04g32020 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g41650.2 |
| Rice Genome Annotation | LOC_Os02g41650.2 |
| Ricechip | LOC_Os02g41650.2 |
| KEGG | osa:4330036 dosa:Os02t0626400-01 |
| Entrez-Gene | 4330036 |