RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42134.2 View Network Show in Genome Browser |
| Other Names | Os02g0632500 |
| Description | ARF GTPase-activating domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25329183-25341941 Nucleotide Length: 2226 |
| Protein-coding | LOC_Os02g42134 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63800 LOC_Os02g11820 LOC_Os02g05660 |
| Downstream Genes | LOC_Os05g51710 LOC_Os03g46340 LOC_Os03g20720 LOC_Os12g18770 LOC_Os03g49770 LOC_Os05g29050 LOC_Os10g33930 LOC_Os10g31770 LOC_Os02g50550 LOC_Os03g24180 LOC_Os07g49330 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42134.2 |
| Rice Genome Annotation | LOC_Os02g42134.2 |
| Ricechip | LOC_Os02g42134.2 |
| KEGG | osa:4330061 dosa:Os02t0632500-01 |
| Entrez-Gene | 4330061 |