RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42580.1 View Network Show in Genome Browser |
| Other Names | Os02g0638400 |
| Description | vacuolar protein-sorting protein bro1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25591926-25595149 Nucleotide Length: 1062 |
| Protein-coding | LOC_Os02g42580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g06490 LOC_Os01g04840 |
| Downstream Genes | LOC_Os09g09480 LOC_Os06g40620 LOC_Os12g02830 LOC_Os11g03060 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6249a osa-miR6249b |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42580.1 |
| Rice Genome Annotation | LOC_Os02g42580.1 |
| Ricechip | LOC_Os02g42580.1 |
| KEGG | osa:4330097 dosa:Os02t0638400-01 |
| Entrez-Gene | 4330097 |