RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42590.3 View Network Show in Genome Browser |
| Other Names | Os02g0638900 |
| Description | WD-40 repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25619021-25624875 Nucleotide Length: 1323 |
| Protein-coding | LOC_Os02g42590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04320 LOC_Os01g54590 LOC_Os02g32430 LOC_Os01g69970 LOC_Os01g52640 LOC_Os01g13730 LOC_Os01g08770 LOC_Os02g13110 LOC_Os01g05420 |
| Downstream Genes | LOC_Os06g05800 LOC_Os04g40940 LOC_Os06g35814 LOC_Os09g12710 LOC_Os04g52400 LOC_Os07g12320 LOC_Os08g38570 LOC_Os03g21990 LOC_Os05g46570 LOC_Os07g41190 LOC_Os08g18150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42590.3 |
| Rice Genome Annotation | LOC_Os02g42590.3 |
| Ricechip | LOC_Os02g42590.3 |
| KEGG | osa:4330099 dosa:Os02t0638900-01 |
| Entrez-Gene | 4330099 |