RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42660.1 View Network Show in Genome Browser |
| Other Names | Os02g0639600 |
| Description | sphingolipid delta desaturase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25660296-25664363 Nucleotide Length: 987 |
| Protein-coding | LOC_Os02g42660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63270 LOC_Os01g73980 LOC_Os02g16500 LOC_Os02g04480 LOC_Os02g01500 |
| Downstream Genes | LOC_Os06g07960 LOC_Os06g07860 LOC_Os09g16920 LOC_Os08g34220 LOC_Os02g48560 LOC_Os08g44010 LOC_Os04g57490 LOC_Os07g12110 LOC_Os06g01630 LOC_Os03g38020 LOC_Os08g44280 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00627 rn01120 rn00363 rn00624 rn00945 rn01110 rn00903 rn00600 rn01100 rn00905 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42660.1 |
| Rice Genome Annotation | LOC_Os02g42660.1 |
| Ricechip | LOC_Os02g42660.1 |
| KEGG | osa:4330104 dosa:Os02t0639600-01 |
| Entrez-Gene | 4330104 |