RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42690.1 View Network Show in Genome Browser |
| Other Names | Os02g0639800 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25671123-25673590 Nucleotide Length: 861 |
| Protein-coding | LOC_Os02g42690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08310 |
| Downstream Genes | LOC_Os11g44810 LOC_Os03g55670 LOC_Os11g14140 LOC_Os03g32790 LOC_Os11g05170 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42690.1 |
| Rice Genome Annotation | LOC_Os02g42690.1 |
| Ricechip | LOC_Os02g42690.1 |
| KEGG | osa:4330106 dosa:Os02t0639800-02 |
| Entrez-Gene | 4330106 |